![]() I opted to use the VRML format to output a mesh of a ribbon representation of PDB entry 4DM9. PDB or what have you and into a mesh format. VMD offers a number of decent export options to get our geometry out of. Your model will appear in the PDF with a uniform grey texture.Īs such, MeshLab is not suitable at this stage. This means that the hard facets of the mesh will be glaringly obvious in the pdf, even if you use an unwieldy degree of subdivision.Ĭolours are not preserved. There is no way to tell MeshLab that the VMD-generated mesh is supposed to be Gouraud-shaded. VMD offers the ability to output as OBJ, which can then be processed with FOSS MeshLab into a U3D file that can be embedded into a PDF. I'm of the personal opinion that 3D in PDF is not as good as it sounds.FOSS replacement suggestions are welcome. One of the tools I have used (DAZ Studio) is apparently 'free for a limited time'.I have tested this with pdfLaTeX and it should work fine in XeLaTeX. This answer assumes basic familiarity with LaTeX. If you are not interested in using LaTeX, stop reading now, as this uses the media15 or movie9 packages to embed U3D in a pdfLaTeX generated PDF.
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